PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_014363-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 237aa    MW: 26044.6 Da    PI: 8.6833
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_014363-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.6e-1180126554
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    +  rE+ RRdr+N++f eL ++l +    + +K++Ka+iL  Av+ + +L
  NNU_014363-RA  80 KACREKMRRDRLNDKFVELGSILDPG---RPPKMDKAAILSDAVRMVTQL 126
                    678**********************8...89**************99988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.93275126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.80E-979131No hitNo description
PfamPF000105.6E-980126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-981132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-1481151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-1482149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MVSPENPNWL YDYGLMDDIS VPGGDFTAST AGFHWNSQPL NGSTSVSLEA DGSFGNSDGL  60
KEMGSKKRVR TASCSAVGSK ACREKMRRDR LNDKFVELGS ILDPGRPPKM DKAAILSDAV  120
RMVTQLRSEA QKLKESNESL QEKIKELKAE KNELRDEKQR LKVEKEKLEQ QIKTLSAQPT  180
SFLPHPSTIP AAFPAQGQAA GNKLMPFIGY PGVAMWQFMP PAAVDTSQDH VLRPPVA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010267809.11e-177PREDICTED: transcription factor ILR3
SwissprotQ9FH371e-108ILR3_ARATH; Transcription factor ILR3
TrEMBLF6HIM01e-134F6HIM0_VITVI; Putative uncharacterized protein
STRINGVIT_12s0059g02650.t011e-134(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-101bHLH family protein